GALAXY platform for sequence data variant calling
- Date The exact date of the course will be announced when enough students have registered. You will then be contacted to confirm your availability
- Duration 1 day – 6 hours Doctoral School equivalent
- Language English or French
- Name of the teachers Sébastien Santini
- Administrative head Matthieu Legendre
- Number of students Group of 4-8 students
Quality check the data
Map reads to a reference genome
Call variants (SNPs, indels)
Visualize on a genome browser
At the end of the workshop, the student will be able to identify sequence variants compared to a reference genome.
Students prerequisites
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- Agreement of the thesis director